Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Selaginella: 99756 | |
Cluster | HCCA clusters: Cluster_25 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g57430 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Orthogroups_2024-Update | |
At4g31070 | No alias | Pentatricopeptide repeat-containing protein At4g31070,... | 0.03 | Orthogroups_2024-Update | |
Brara.F01301.1 | No alias | RNA editing factor *(OTP970) | 0.02 | Orthogroups_2024-Update | |
Glyma.08G208902 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G286100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.16G035600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
PSME_00018763-RA | No alias | (at1g11290 : 389.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
PSME_00038079-RA | No alias | (at3g02010 : 593.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00042881-RA | No alias | (at4g37170 : 685.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00056947-RA | No alias | (at2g22070 : 647.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
Pp1s178_15V6 | No alias | T1B8.1; pentatricopeptide (PPR) repeat-containing... | 0.02 | Orthogroups_2024-Update | |
Seita.5G424500.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.004G199400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEP | Predicted GO |
MF | GO:0004334 | fumarylacetoacetase activity | IEP | Predicted GO |
BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
BP | GO:0008150 | biological_process | IEP | Predicted GO |
MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0015696 | ammonium transport | IEP | Predicted GO |
MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Predicted GO |
MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Predicted GO |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 445 | 487 |
IPR002885 | Pentatricopeptide_repeat | 547 | 579 |
IPR002885 | Pentatricopeptide_repeat | 283 | 331 |
IPR002885 | Pentatricopeptide_repeat | 587 | 634 |
IPR002885 | Pentatricopeptide_repeat | 688 | 735 |
IPR002885 | Pentatricopeptide_repeat | 87 | 134 |
IPR002885 | Pentatricopeptide_repeat | 389 | 413 |
IPR002885 | Pentatricopeptide_repeat | 360 | 386 |
IPR002885 | Pentatricopeptide_repeat | 163 | 190 |
IPR002885 | Pentatricopeptide_repeat | 662 | 687 |
IPR002885 | Pentatricopeptide_repeat | 488 | 516 |
No external refs found! |