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  4. Sequence
  5. 99756

99756


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Selaginella: 99756
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
At3g57430 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 Orthogroups_2024-Update
At4g31070 No alias Pentatricopeptide repeat-containing protein At4g31070,... 0.03 Orthogroups_2024-Update
Brara.F01301.1 No alias RNA editing factor *(OTP970) 0.02 Orthogroups_2024-Update
Glyma.08G208902 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G286100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Glyma.16G035600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00018763-RA No alias (at1g11290 : 389.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00038079-RA No alias (at3g02010 : 593.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00042881-RA No alias (at4g37170 : 685.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
PSME_00056947-RA No alias (at2g22070 : 647.0) pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Pp1s178_15V6 No alias T1B8.1; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Seita.5G424500.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.004G199400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004334 fumarylacetoacetase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Predicted GO
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 445 487
IPR002885 Pentatricopeptide_repeat 547 579
IPR002885 Pentatricopeptide_repeat 283 331
IPR002885 Pentatricopeptide_repeat 587 634
IPR002885 Pentatricopeptide_repeat 688 735
IPR002885 Pentatricopeptide_repeat 87 134
IPR002885 Pentatricopeptide_repeat 389 413
IPR002885 Pentatricopeptide_repeat 360 386
IPR002885 Pentatricopeptide_repeat 163 190
IPR002885 Pentatricopeptide_repeat 662 687
IPR002885 Pentatricopeptide_repeat 488 516
No external refs found!