- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : PPR repeat
Gene families : OG_42_0000146 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000146_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen01g035710 | |
| Cluster | HCCA clusters: Cluster_29 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 402120 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 406783 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.02 | Orthogroups_2024-Update | |
| 420704 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.04 | Orthogroups_2024-Update | |
| 444770 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| 444771 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At1g80270 | No alias | PPR596 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Z6] | 0.04 | Orthogroups_2024-Update | |
| At2g20710 | No alias | Pentatricopeptide repeat-containing protein At2g20710,... | 0.03 | Orthogroups_2024-Update | |
| At3g15590 | No alias | Pentatricopeptide repeat-containing protein At3g15590,... | 0.05 | Orthogroups_2024-Update | |
| At5g09450 | No alias | Pentatricopeptide repeat-containing protein At5g09450,... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g49750 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi2g10850 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.06 | Orthogroups_2024-Update | |
| Bradi5g17360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.B00312.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Brara.C02834.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Brara.F01064.1 | No alias | RNA editing factor *(POCO) | 0.04 | Orthogroups_2024-Update | |
| Brara.G02029.1 | No alias | RNA editing factor *(POCO) | 0.05 | Orthogroups_2024-Update | |
| GRMZM2G130366 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G131817 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G135940 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G160994 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G000600 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.07 | Orthogroups_2024-Update | |
| Glyma.02G011200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G108100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G119200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.08G176700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.12G203800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.19G129900 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.08 | Orthogroups_2024-Update | |
| HORVU2Hr1G093220.6 | No alias | splicing factor *(CRR16) | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G011310.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| LOC_Os01g19490 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os04g46010 | No alias | PPR repeat domain containing protein, putative, expressed | 0.03 | Orthogroups_2024-Update | |
| LOC_Os07g12140 | No alias | PPR repeat domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os10g35750 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| LOC_Os12g07260 | No alias | PPR repeat domain containing protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_10435629g0010 | No alias | (at1g60770 : 266.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_77400g0010 | No alias | (at1g15480 : 202.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| MA_87771g0010 | No alias | (at1g02150 : 108.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| Potri.002G139400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.07 | Orthogroups_2024-Update | |
| Potri.013G132500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.013G132700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.014G050300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.1 | Orthogroups_2024-Update | |
| Potri.016G036100 | No alias | PENTATRICOPEPTIDE REPEAT 596 | 0.05 | Orthogroups_2024-Update | |
| Seita.2G083900.1 | No alias | RNA editing factor *(POCO) | 0.03 | Orthogroups_2024-Update | |
| Seita.2G158100.1 | No alias | splicing factor *(CRR16) | 0.05 | Orthogroups_2024-Update | |
| Seita.3G349700.1 | No alias | splicing factor *(RTP7) | 0.04 | Orthogroups_2024-Update | |
| Seita.4G018800.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sobic.002G078100.1 | No alias | RNA editing factor *(POCO) | 0.08 | Orthogroups_2024-Update | |
| Sobic.003G144000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.006G100000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G166000.1 | No alias | splicing factor *(CRR16) | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G018900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g079320 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.07 | Orthogroups_2024-Update | |
| Solyc01g089870 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.17 | Orthogroups_2024-Update | |
| Solyc02g078330 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.07 | Orthogroups_2024-Update | |
| Solyc06g005140 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc07g063220 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |