1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g108240

Solyc01g108240


Description : Ethylene Response Factor D.3


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g108240
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
A4A49_03112 No alias ethylene-responsive transcription factor crf4 0.02 Orthogroups_2024-Update
A4A49_16120 No alias ethylene-responsive transcription factor erf061 0.04 Orthogroups_2024-Update
A4A49_20932 No alias ethylene-responsive transcription factor erf114 0.02 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.03 Orthogroups_2024-Update
At1g12630 No alias Ethylene-responsive transcription factor ERF027... 0.03 Orthogroups_2024-Update
At1g15360 No alias Ethylene-responsive transcription factor WIN1... 0.03 Orthogroups_2024-Update
At1g71450 No alias Ethylene-responsive transcription factor ERF021... 0.03 Orthogroups_2024-Update
At3g16770 No alias Ethylene-responsive transcription factor RAP2-3... 0.03 Orthogroups_2024-Update
At4g25490 No alias DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3] 0.03 Orthogroups_2024-Update
At5g51190 No alias Ethylene-responsive transcription factor ERF105... 0.03 Orthogroups_2024-Update
Bradi1g54450 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Bradi2g56145 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.E02969.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.F02721.1 No alias subgroup ERF-V transcription factor 0.03 Orthogroups_2024-Update
Brara.G03123.1 No alias subgroup ERF-VII transcription factor & transcription... 0.02 Orthogroups_2024-Update
Brara.I03383.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Brara.K00687.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G080516 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Glyma.02G080200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G015900 No alias related to AP2 11 0.04 Orthogroups_2024-Update
Glyma.06G163700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G250100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G320700 No alias ethylene responsive element binding factor 3 0.04 Orthogroups_2024-Update
Glyma.09G233800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G203100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G079600 No alias cytokinin response factor 4 0.04 Orthogroups_2024-Update
Glyma.18G252300 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
HORVU1Hr1G082310.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G077310.1 No alias subgroup ERF-VII transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G080340.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g43790 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g08490 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g52090 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g27930 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g08340 No alias AP2 domain containing protein, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g36000 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10431529g0030 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_164803g0010 No alias (at5g11590 : 119.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_4032g0010 No alias (q9sxs8|erf3_tobac : 85.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_426919g0020 No alias (at1g19210 : 104.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_81029g0010 No alias (q9sxs8|erf3_tobac : 95.1) Ethylene-responsive... 0.03 Orthogroups_2024-Update
MA_9294379g0010 No alias (at5g11590 : 120.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_938274g0010 No alias (at4g17500 : 97.8) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00005183-RA No alias (at5g47220 : 92.8) Encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.04 Orthogroups_2024-Update
PSME_00037661-RA No alias (at4g17500 : 149.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00052064-RA No alias (at5g21960 : 132.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G110500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.001G397200 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Potri.005G195000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.005G233300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G218200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.007G046500 No alias DREB and EAR motif protein 2 0.03 Orthogroups_2024-Update
Potri.009G101900 No alias redox responsive transcription factor 1 0.03 Orthogroups_2024-Update
Potri.012G134100 No alias C-repeat-binding factor 4 0.04 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.2G276200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G291500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G022000.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Seita.8G237900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G320700.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G296300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G297600.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Sobic.005G103100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G080200.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G259000.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sobic.008G050600.2 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G170800.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.07 Orthogroups_2024-Update
Solyc01g095500 No alias Sl Cytokinin Response Factor 5 0.03 Orthogroups_2024-Update
Solyc03g124110 No alias CBF 0.03 Orthogroups_2024-Update
Solyc05g052030 No alias ethylene response factor 4 0.04 Orthogroups_2024-Update
Solyc06g082590 No alias DNA-binding protein Pti6 0.04 Orthogroups_2024-Update
Solyc07g054220 No alias Ethylene-responsive transcription factor ERF053 (AHRD... 0.03 Orthogroups_2024-Update
Solyc09g066360 No alias Ethylene Response Factor C.3 0.04 Orthogroups_2024-Update
Solyc09g089920 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen02g033000 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen04g006680 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen06g025620 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen09g030200 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002682 regulation of immune system process IEP Predicted GO
BP GO:0002831 regulation of response to biotic stimulus IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0010112 regulation of systemic acquired resistance IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0031347 regulation of defense response IEP Predicted GO
BP GO:0032101 regulation of response to external stimulus IEP Predicted GO
BP GO:0043900 regulation of multi-organism process IEP Predicted GO
BP GO:0045088 regulation of innate immune response IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050776 regulation of immune response IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 184 233
No external refs found!