1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g036490

Sopen01g036490


Description : GATA zinc finger


Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g036490
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
A4A49_09786 No alias gata transcription factor 2 0.02 Orthogroups_2024-Update
At4g36620 No alias GATA transcription factor 19... 0.03 Orthogroups_2024-Update
At5g56860 No alias GATA transcription factor 21... 0.03 Orthogroups_2024-Update
Bradi2g35057 No alias GATA transcription factor 23 0.02 Orthogroups_2024-Update
Bradi3g08240 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.A00355.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.A00502.1 No alias transcription factor *(A/B-GATA) 0.04 Orthogroups_2024-Update
Brara.A02105.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.B01250.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.C01244.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.C03804.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.C04348.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.F02940.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Brara.I01080.1 No alias transcription factor *(A/B-GATA) 0.03 Orthogroups_2024-Update
Brara.J01109.1 No alias transcription factor *(A/B-GATA) 0.02 Orthogroups_2024-Update
Cre08.g358532 No alias GATA transcription factor 9 0.02 Orthogroups_2024-Update
Glyma.08G142500 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.17G055200 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.17G228700 No alias cytokinin-responsive gata factor 1 0.07 Orthogroups_2024-Update
Potri.005G066100 No alias GATA transcription factor 12 0.02 Orthogroups_2024-Update
evm.model.tig00001094.21 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000679 Znf_GATA 167 200
No external refs found!