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  5. Sopen01g038570

Sopen01g038570


Description : SNF2 family N-terminal domain


Gene families : OG_42_0007138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007138_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen01g038570
Cluster HCCA clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Bradi3g01297 No alias transcription regulatory protein SNF2, putative 0.03 Orthogroups_2024-Update
Glyma.09G257900 No alias transcription regulatory protein SNF2, putative 0.04 Orthogroups_2024-Update
Glyma.18G234700 No alias transcription regulatory protein SNF2, putative 0.03 Orthogroups_2024-Update
Mp1g17010.1 No alias chromatin remodeling factor (Snf2) 0.02 Orthogroups_2024-Update
PSME_00012052-RA No alias (at2g46020 : 1579.0) Encodes a SWI/SNF chromatin... 0.04 Orthogroups_2024-Update
Pp1s25_252V6 No alias snf2 super family 0.02 Orthogroups_2024-Update
Seita.2G227500.1 No alias SMARCA component *(SYD/BRM/MINU) 0.03 Orthogroups_2024-Update
Seita.2G227600.1 No alias SMARCA component *(SYD/BRM/MINU) 0.02 Orthogroups_2024-Update
Sobic.004G009600.1 No alias SMARCA component *(SYD/BRM/MINU) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 1334 1445
IPR014978 Gln-Leu-Gln_QLQ 480 513
IPR000330 SNF2_N 1017 1313
No external refs found!