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Description : PPR repeat
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen01g038630 | |
| Cluster | HCCA clusters: Cluster_185 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 131810 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| 74842 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| At1g11290 | No alias | CRR22 [Source:UniProtKB/TrEMBL;Acc:A0A178WFR8] | 0.02 | Orthogroups_2024-Update | |
| At3g23330 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
| At3g46790 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | Orthogroups_2024-Update | |
| At4g37380 | No alias | Pentatricopeptide repeat-containing protein ELI1,... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g47160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi1g75980 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g04890 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Bradi3g59950 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Bradi5g14000 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Brara.H01279.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G399433 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G462417 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.02G087100 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G174500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.03G073766 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.06G161900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.07G127400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.08G208902 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.09G180500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.14G066100 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.15G091951 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.17G024900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| LOC_Os08g25280 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_135075g0020 | No alias | (at3g57430 : 714.0) Encodes a chloroplast RNA editing... | 0.02 | Orthogroups_2024-Update | |
| MA_168311g0010 | No alias | (at4g02750 : 377.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00001942-RA | No alias | (at3g57430 : 689.0) Encodes a chloroplast RNA editing... | 0.02 | Orthogroups_2024-Update | |
| PSME_00016877-RA | No alias | (at4g13650 : 622.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00017551-RA | No alias | (at4g18750 : 421.0) Encodes a pentatricopeptide (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00042876-RA | No alias | (at3g23330 : 160.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00052680-RA | No alias | (at3g46790 : 263.0) Encodes a member of a PCMP (plant... | 0.02 | Orthogroups_2024-Update | |
| PSME_00055422-RA | No alias | (at2g13600 : 420.0) Pentatricopeptide repeat (PPR)... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056424-RA | No alias | (at2g22070 : 461.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G066100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.001G108500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.002G239600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.004G237000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.012G108000 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.015G018700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.015G047600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.016G128900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.017G137200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.T137000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.7G205600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G001200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.002G200500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.003G433600.1 | No alias | RNA editing factor *(OTP72) | 0.04 | Orthogroups_2024-Update | |
| Solyc01g006920 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g081290 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc01g081560 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g091610 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g097670 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g112200 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.06 | Orthogroups_2024-Update | |
| Solyc02g065030 | No alias | No description available | 0.04 | Orthogroups_2024-Update | |
| Solyc02g088650 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc02g093380 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g119950 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc04g064750 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc06g084580 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.04 | Orthogroups_2024-Update | |
| Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc09g010070 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc09g090220 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g007230 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g011860 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.05 | Orthogroups_2024-Update | |
| Solyc11g071370 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.05 | Orthogroups_2024-Update | |
| Solyc12g042400 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc12g096680 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |