1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen01g038820

Sopen01g038820


Description : Myb-like DNA-binding domain


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g038820
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
A4A49_01132 No alias protein reveille 8 0.09 Orthogroups_2024-Update
At2g46830 No alias Protein CCA1 [Source:UniProtKB/Swiss-Prot;Acc:P92973] 0.04 Orthogroups_2024-Update
At3g09600 No alias Protein REVEILLE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWU3] 0.04 Orthogroups_2024-Update
At5g02840 No alias LCL1 [Source:UniProtKB/TrEMBL;Acc:A0A178U8Z5] 0.03 Orthogroups_2024-Update
At5g17300 No alias Protein REVEILLE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4KGY6] 0.04 Orthogroups_2024-Update
Bradi1g29680 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g51757 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03523.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Brara.C00086.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Brara.C00761.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Brara.E00100.1 No alias circadian clock core oscillator protein *(LHY/CCA1) &... 0.03 Orthogroups_2024-Update
Brara.J02851.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Cre12.g514400 No alias circadian clock associated 1 0.01 Orthogroups_2024-Update
Glyma.09G167900 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G048500 No alias Homeodomain-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.13G136300 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G217700 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
LOC_Os02g46030 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g01670 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
PSME_00043429-RA No alias (at5g17300 : 121.0) Myb-like transcription factor that... 0.03 Orthogroups_2024-Update
Pp1s325_68V6 No alias lhy protein 0.03 Orthogroups_2024-Update
Seita.1G272700.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.02 Orthogroups_2024-Update
Seita.4G004600.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Seita.4G288100.1 No alias transcription factor *(REVEILLE) 0.03 Orthogroups_2024-Update
Sobic.004G281800.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G004300.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Sobic.010G275700.1 No alias transcription factor *(REVEILLE) 0.04 Orthogroups_2024-Update
Solyc01g095030 No alias Myb family transcription factor family protein (AHRD... 0.14 Orthogroups_2024-Update
Solyc03g098320 No alias Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) 0.06 Orthogroups_2024-Update
Solyc10g084370 No alias MYB transcription factor (AHRD V3.3 *** B5TV64_CAMSI) 0.05 Orthogroups_2024-Update
evm.model.contig_2210.1 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 53 97
No external refs found!