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  5. Sopen01g038890

Sopen01g038890


Description : WRKY DNA -binding domain


Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g038890
Cluster HCCA clusters: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
A4A49_37904 No alias putative wrky transcription factor 12 0.03 Orthogroups_2024-Update
AC209050.3_FG003 No alias WRKY DNA-binding protein 40 0.02 Orthogroups_2024-Update
At4g01250 No alias WRKY transcription factor 22... 0.05 Orthogroups_2024-Update
Bradi2g22440 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
Bradi5g17395 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Brara.C01871.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G057116 No alias WRKY DNA-binding protein 50 0.03 Orthogroups_2024-Update
GRMZM2G111711 No alias WRKY DNA-binding protein 40 0.03 Orthogroups_2024-Update
GRMZM2G169966 No alias WRKY DNA-binding protein 33 0.03 Orthogroups_2024-Update
GRMZM2G304573 No alias WRKY DNA-binding protein 9 0.02 Orthogroups_2024-Update
GRMZM2G411766 No alias WRKY family transcription factor 0.02 Orthogroups_2024-Update
GRMZM5G871347 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G056800 No alias WRKY DNA-binding protein 57 0.04 Orthogroups_2024-Update
Glyma.09G080000 No alias WRKY family transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G021120.2 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g54600 No alias WRKY13, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g45230 No alias WRKY58, expressed 0.03 Orthogroups_2024-Update
Mp4g00200.1 No alias transcription factor (WRKY) 0.03 Orthogroups_2024-Update
PSME_00001545-RA No alias (at1g29860 : 137.0) member of WRKY Transcription Factor;... 0.04 Orthogroups_2024-Update
PSME_00024308-RA No alias (at3g01970 : 113.0) member of WRKY Transcription Factor;... 0.02 Orthogroups_2024-Update
PSME_00037572-RA No alias (at1g64000 : 105.0) member of WRKY Transcription Factor;... 0.03 Orthogroups_2024-Update
PSME_00049501-RA No alias (at1g62300 : 149.0) Encodes a transcription factor... 0.03 Orthogroups_2024-Update
Potri.006G224100 No alias WRKY DNA-binding protein 50 0.02 Orthogroups_2024-Update
Potri.T043800 No alias WRKY DNA-binding protein 75 0.03 Orthogroups_2024-Update
Pp1s426_30V6 No alias wrky transcription factor 6 0.02 Orthogroups_2024-Update
Sobic.001G006600.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.002G174300.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G065900.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.007G118301.1 No alias WRKY-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G209100.1 No alias WRKY-type transcription factor 0.02 Orthogroups_2024-Update
Solyc08g067360 No alias WRKY transcription factor 45 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003657 WRKY_dom 173 230
No external refs found!