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  5. Sopen01g038970

Sopen01g038970


Description : Ring finger domain


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g038970
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
172324 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
A4A49_09968 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
A4A49_30300 No alias ring-h2 finger protein atl54 0.03 Orthogroups_2024-Update
At4g09100 No alias RING-H2 finger protein ATL39... 0.02 Orthogroups_2024-Update
At5g10380 No alias E3 ubiquitin-protein ligase RING1... 0.03 Orthogroups_2024-Update
At5g17600 No alias RING-H2 finger protein ATL52... 0.02 Orthogroups_2024-Update
Brara.C02593.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
LOC_Os01g60730 No alias RING-H2 finger protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_114175g0010 No alias (at3g16720 : 124.0) RING-H2 protein induced after... 0.04 Orthogroups_2024-Update
MA_6934973g0010 No alias (at5g01880 : 125.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_77628g0010 No alias (at1g72310 : 116.0) Encodes a putative RING-H2 zinc... 0.02 Orthogroups_2024-Update
Mp1g27170.1 No alias RING-H2-class E3 ligase 0.03 Orthogroups_2024-Update
Pp1s132_168V6 No alias ring finger 0.03 Orthogroups_2024-Update
Seita.2G087800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.004G170300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G157300.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc05g055140 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 0.03 Orthogroups_2024-Update
evm.model.tig00020563.21 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 189 231
No external refs found!