Sopen01g039040

Description : Glycosyl hydrolases family 18

Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g039040
Cluster	HCCA clusters: Cluster_141

Target	Alias	Description	ECC score	Gene Family Method
232123	No alias	chitinase A	0.02	Orthogroups_2024-Update
Glyma.08G300300	No alias	chitinase A	0.03	Orthogroups_2024-Update
LOC_Os01g64100	No alias	glycosyl hydrolase, putative, expressed	0.02	Orthogroups_2024-Update
Mp2g08740.1	No alias	Acidic endochitinase SE2 OS=Beta vulgaris...	0.02	Orthogroups_2024-Update
Seita.5G389800.1	No alias	acidic chitinase *(CHIA)	0.03	Orthogroups_2024-Update
Seita.5G390000.1	No alias	acidic chitinase *(CHIA)	0.02	Orthogroups_2024-Update
Solyc01g095260	No alias	Acidic endochitinase (AHRD V3.3 *** W9R015_9ROSA)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001223	Glyco_hydro18_cat	28	188

External Links

No external refs found!