Sopen01g040080

Description : Homeobox domain

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g040080
Cluster	HCCA clusters: Cluster_154

Target	Alias	Description	ECC score	Gene Family Method
19476	No alias	homeobox 1	0.02	Orthogroups_2024-Update
81609	No alias	homeobox protein 16	0.02	Orthogroups_2024-Update
A4A49_10256	No alias	homeobox-leucine zipper protein hat5	0.03	Orthogroups_2024-Update
At3g01220	No alias	Homeobox-leucine zipper protein ATHB-20...	0.04	Orthogroups_2024-Update
At3g61890	No alias	HB-12 [Source:UniProtKB/TrEMBL;Acc:A0A178VND2]	0.03	Orthogroups_2024-Update
Bradi3g56180	No alias	homeobox 1	0.03	Orthogroups_2024-Update
Brara.A03941.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.B01411.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.D00081.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E03658.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G00177.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G01237.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00890.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04578.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.18G126800	No alias	homeobox 1	0.04	Orthogroups_2024-Update
Glyma.19G021100	No alias	homeobox 3	0.02	Orthogroups_2024-Update
Glyma.19G189700	No alias	homeobox 51	0.02	Orthogroups_2024-Update
HORVU6Hr1G072810.6	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
LOC_Os04g45810	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
MA_60543g0010	No alias	(at5g15150 : 130.0) homeobox-containing gene with an...	0.03	Orthogroups_2024-Update
PSME_00000196-RA	No alias	(at3g01470 : 176.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
PSME_00033843-RA	No alias	(at3g01470 : 181.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
Potri.006G117700	No alias	homeobox 51	0.03	Orthogroups_2024-Update
Potri.007G029500	No alias	homeobox protein 40	0.03	Orthogroups_2024-Update
Seita.1G253700.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Seita.2G193200.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G163900.1	No alias	HD-ZIP I/II-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g096320	No alias	Homeobox-leucine zipper protein (AHRD V3.3 *** M4W1Z7_TOBAC)	0.03	Orthogroups_2024-Update
Solyc02g086930	No alias	Homeobox associated leucine zipper protein (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc05g006980	No alias	Homeobox leucine zipper family protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen03g006930	No alias	Homeobox domain	0.04	Orthogroups_2024-Update
Sopen05g002940	No alias	Homeobox domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	45	96
IPR003106	Leu_zip_homeo	98	138

External Links

No external refs found!

Sopen01g040080

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation