Sopen01g040570

Description : AP2 domain

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g040570
Cluster	HCCA clusters: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10848	No alias	ethylene-responsive transcription factor rap2-7	0.03	Orthogroups_2024-Update
A4A49_19373	No alias	ethylene-responsive transcription factor rap2-7	0.03	Orthogroups_2024-Update
A4A49_19840	No alias	ap2-like ethylene-responsive transcription factor ail6	0.03	Orthogroups_2024-Update
At4g36920	No alias	Floral homeotic protein APETALA 2...	0.02	Orthogroups_2024-Update
At5g17430	No alias	BABY BOOM [Source:UniProtKB/TrEMBL;Acc:A7L9U1]	0.03	Orthogroups_2024-Update
Bradi4g30617	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Bradi5g24360	No alias	AINTEGUMENTA-like 5	0.03	Orthogroups_2024-Update
Brara.B02033.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Brara.G03685.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Brara.J01807.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Cre01.g009650	No alias	AINTEGUMENTA-like 5	0.01	Orthogroups_2024-Update
GRMZM2G076602	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G113078	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.01G022500	No alias	AINTEGUMENTA-like 6	0.02	Orthogroups_2024-Update
Glyma.05G091200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.05G108600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G021000	No alias	ARIA-interacting double AP2 domain protein	0.03	Orthogroups_2024-Update
Glyma.08G220800	No alias	ARIA-interacting double AP2 domain protein	0.04	Orthogroups_2024-Update
Glyma.08G227700	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.09G199800	No alias	AINTEGUMENTA-like 6	0.06	Orthogroups_2024-Update
Glyma.09G248200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G171400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.13G096900	No alias	AINTEGUMENTA-like 5	0.04	Orthogroups_2024-Update
Glyma.17G232290	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G070230.3	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
HORVU7Hr1G116220.9	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
LOC_Os01g67410	No alias	AP2/EREBP transcription factor BABY BOOM, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g13170	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_121578g0010	No alias	(at4g37750 : 394.0) ANT is required for control of cell...	0.04	Orthogroups_2024-Update
MA_2193g0020	No alias	(at4g36920 : 276.0) Encodes a floral homeotic gene, a...	0.04	Orthogroups_2024-Update
PSME_00039531-RA	No alias	(at4g37750 : 368.0) ANT is required for control of cell...	0.03	Orthogroups_2024-Update
PSME_00040413-RA	No alias	(at2g41710 : 299.0) Integrase-type DNA-binding...	0.04	Orthogroups_2024-Update
Potri.001G018400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G205700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.005G140700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G179900	No alias	ARIA-interacting double AP2 domain protein	0.02	Orthogroups_2024-Update
Potri.007G011600	No alias	AINTEGUMENTA-like 6	0.02	Orthogroups_2024-Update
Pp1s131_139V6	No alias	ap2 domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s83_93V6	No alias	floral homeotic protein	0.02	Orthogroups_2024-Update
Seita.3G033600.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Seita.3G165200.1	No alias	AP2-type transcription factor *(WRI/AIL) &...	0.03	Orthogroups_2024-Update
Seita.4G204700.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Seita.5G356300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.06	Orthogroups_2024-Update
Seita.8G031900.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Sobic.001G036800.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Sobic.001G392700.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Sobic.003G332300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Sobic.003G390600.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Sobic.004G214300.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.04	Orthogroups_2024-Update
Solyc02g092050	No alias	AP2-like ethylene-responsive transcription factor (AHRD...	0.06	Orthogroups_2024-Update
Solyc04g077490	No alias	AP2-like ethylene-responsive transcription factor (AHRD...	0.04	Orthogroups_2024-Update
Solyc06g075510	No alias	APETALA2e	0.03	Orthogroups_2024-Update
Solyc11g010710	No alias	AP2-like ethylene-responsive transcription factor (AHRD...	0.05	Orthogroups_2024-Update
Sopen06g025830	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen09g002130	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	171	222
IPR001471	AP2/ERF_dom	70	128

External Links

No external refs found!

Sopen01g040570

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation