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  5. Sopen01g040860

Sopen01g040860


Description : Ankyrin repeats (3 copies)


Gene families : OG_42_0000377 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g040860
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g42350 No alias ankyrin, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g01090.1 No alias Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza... 0.02 Orthogroups_2024-Update
Seita.3G114400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G002000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g097190 No alias Ankyrin repeat family protein (AHRD V3.3 *** A0A061F958_THECC) 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 196 274
IPR020683 Ankyrin_rpt-contain_dom 20 116
IPR020683 Ankyrin_rpt-contain_dom 121 183
No external refs found!