Sopen01g041670

Description : Uncharacterised protein family (UPF0113)

Gene families : OG_42_0004539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004539_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g041670
Cluster	HCCA clusters: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
At4g15770	No alias	60S ribosome subunit biogenesis protein NIP7 homolog...	0.04	Orthogroups_2024-Update
Brara.H00822.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Cre12.g528900	No alias	RNA binding	0.03	Orthogroups_2024-Update
GRMZM2G468932	No alias	RNA binding	0.02	Orthogroups_2024-Update
Glyma.17G095400	No alias	RNA binding	0.02	Orthogroups_2024-Update
Kfl00307_0030	kfl00307_0030_v1.1	(at4g15770 : 268.0) RNA binding; FUNCTIONS IN: RNA...	0.07	Orthogroups_2024-Update
LOC_Os07g47420	No alias	60S ribosome subunit biogenesis protein NIP7, putative, expressed	0.03	Orthogroups_2024-Update
Potri.008G209600	No alias	RNA binding	0.03	Orthogroups_2024-Update
Pp1s104_30V6	No alias	No description available	0.02	Orthogroups_2024-Update
Seita.9G032900.1	No alias	Unknown function	0.07	Orthogroups_2024-Update
Sobic.004G325200.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
Solyc01g098100	No alias	60S ribosome subunit biogenesis protein NIP7 homolog...	0.17	Orthogroups_2024-Update
evm.model.contig_3401.15	No alias	(at4g15770 : 210.0) RNA binding; FUNCTIONS IN: RNA...	0.02	Orthogroups_2024-Update
evm.model.tig00020684.42	No alias	(at4g15770 : 193.0) RNA binding; FUNCTIONS IN: RNA...	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005155	Rbsml_synth_fac_NIP7-like	104	182

External Links

No external refs found!