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  5. Sopen01g041940

Sopen01g041940


Description : Leucine rich repeat


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g041940
Cluster HCCA clusters: Cluster_320

Target Alias Description ECC score Gene Family Method Actions
Solyc01g008410 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Solyc05g012430 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Sopen01g003910 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 201 222
IPR001611 Leu-rich_rpt 686 743
IPR001611 Leu-rich_rpt 881 940
IPR001611 Leu-rich_rpt 1099 1156
IPR001611 Leu-rich_rpt 507 567
IPR001611 Leu-rich_rpt 392 448
IPR001611 Leu-rich_rpt 1477 1536
IPR001611 Leu-rich_rpt 226 285
IPR001611 Leu-rich_rpt 321 376
IPR001611 Leu-rich_rpt 1355 1414
IPR001611 Leu-rich_rpt 1619 1677
IPR001611 Leu-rich_rpt 951 1009
No external refs found!