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  5. Sopen01g042720

Sopen01g042720


Description : Lipoxygenase


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g042720
Cluster HCCA clusters: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
170977 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
A4A49_16086 No alias lipoxygenase 6, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_32174 No alias linoleate 13s-lipoxygenase 3-1, chloroplastic 0.03 Orthogroups_2024-Update
Bradi3g59710 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Bradi5g11590 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
Brara.B01571.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Brara.E02008.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
GRMZM5G822593 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
Glyma.03G264300 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Glyma.15G026300 No alias lipoxygenase 1 0.03 Orthogroups_2024-Update
LOC_Os02g10120 No alias lipoxygenase, putative, expressed 0.02 Orthogroups_2024-Update
MA_161903g0010 No alias (p37831|lox1_soltu : 733.0) Lipoxygenase 1 (EC... 0.02 Orthogroups_2024-Update
PSME_00006847-RA No alias (at1g55020 : 964.0) lipoxygenase, a defense gene... 0.04 Orthogroups_2024-Update
Potri.001G015400 No alias lipoxygenase 2 0.02 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Sobic.003G385900.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.006G095600.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
Sobic.008G191000.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.02 Orthogroups_2024-Update
Solyc01g099160 No alias Lipoxygenase (AHRD V1 **** Q9FT17_SOLLC)%3B contains... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 65 158
IPR013819 LipOase_C 172 845
No external refs found!