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  5. Sopen01g042800

Sopen01g042800


Description : Leucine rich repeat N-terminal domain


Gene families : OG_42_0000172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g042800
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G272100 No alias disease resistance family protein / LRR family protein 0.02 Orthogroups_2024-Update
Glyma.16G173900 No alias disease resistance family protein / LRR family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G094810.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G087410.3 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G087420.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g41780 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_186385g0010 No alias (at2g34930 : 356.0) disease resistance family protein /... 0.03 Orthogroups_2024-Update
Seita.5G216100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.6G230900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G153400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.005G127800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 46 83
No external refs found!