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  5. Sopen01g042960

Sopen01g042960


Description : WD domain, G-beta repeat


Gene families : OG_42_0001686 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g042960
Cluster HCCA clusters: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Brara.G01981.1 No alias component *(ATG18) of autophagosome ATG9-2-18 membrane... 0.03 Orthogroups_2024-Update
GRMZM2G146280 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G235800 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Mp1g05420.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.02 Orthogroups_2024-Update
Sopen06g014670 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update
evm.model.tig00021350.13 No alias (at3g62770 : 215.0) Required for autophagosome formation... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 311 337
No external refs found!