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  5. Solyc01g108940

Solyc01g108940


Description : B3 domain-containing protein (AHRD V3.3 *-* W9QJE4_9ROSA)


Gene families : OG_42_0003962 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003962_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g108940
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
At4g34400 No alias B3 domain-containing protein At4g34400... 0.02 Orthogroups_2024-Update
Brara.F01160.1 No alias REM-type transcription factor 0.03 Orthogroups_2024-Update
Sopen01g040490 No alias B3 DNA binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 8 93
IPR003340 B3_DNA-bd 245 313
No external refs found!