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  5. Sopen01g043380

Sopen01g043380


Description : gag-polypeptide of LTR copia-type


Gene families : OG_42_0001783 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001783_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g043380
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Pp1s43_86V6 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029472 Copia-like_N 17 61
IPR005162 Retrotrans_gag_dom 82 185
No external refs found!