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  5. Sopen01g043580

Sopen01g043580


Description : WD domain, G-beta repeat


Gene families : OG_42_0000373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g043580
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Brara.F01080.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.02 Orthogroups_2024-Update
MA_162723g0010 No alias (at3g15880 : 276.0) WUS-interacting protein 2 (WSIP2);... 0.04 Orthogroups_2024-Update
PSME_00001612-RA No alias (at1g15750 : 1288.0) Encodes a protein with several WD40... 0.03 Orthogroups_2024-Update
PSME_00023132-RA No alias (at1g80490 : 510.0) TOPLESS-related 1 (TPR1); INVOLVED... 0.06 Orthogroups_2024-Update
PSME_00023926-RA No alias (at1g80490 : 545.0) TOPLESS-related 1 (TPR1); INVOLVED... 0.02 Orthogroups_2024-Update
Potri.001G200500 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
Potri.006G258000 No alias Transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Potri.013G012100 No alias TOPLESS-related 3 0.02 Orthogroups_2024-Update
Potri.018G023800 No alias TOPLESS-related 1 0.02 Orthogroups_2024-Update
Seita.6G051500.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.03 Orthogroups_2024-Update
Solyc03g116750 No alias WD-repeat protein, putative (AHRD V3.3 *** B9SMF9_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 451 484
IPR001680 WD40_repeat 912 945
No external refs found!