Sopen01g043610

Description : Single-strand binding protein family

Gene families : OG_42_0008087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008087_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g043610
Cluster	HCCA clusters: Cluster_285

Target	Alias	Description	ECC score	Gene Family Method
Brara.I02553.1	No alias	ssDNA-binding protein *(SSB)	0.03	Orthogroups_2024-Update
LOC_Os05g43440	No alias	single-stranded DNA-binding protein, putative, expressed	0.03	Orthogroups_2024-Update
Seita.3G184300.1	No alias	ssDNA-binding protein *(SSB)	0.03	Orthogroups_2024-Update
Solyc01g100080	No alias	Single-stranded DNA-binding protein (AHRD V3.3 *** G7I9F0_MEDTR)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003697	single-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000424	Primosome_PriB/ssb	81	184

External Links

No external refs found!