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  5. Sopen01g043900

Sopen01g043900


Description : Calreticulin family


Gene families : OG_42_0001219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g043900
Cluster HCCA clusters: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
At1g09210 No alias Calreticulin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q38858] 0.04 Orthogroups_2024-Update
At1g56340 No alias Calreticulin-1 [Source:UniProtKB/Swiss-Prot;Acc:O04151] 0.04 Orthogroups_2024-Update
Bradi1g02940 No alias calreticulin 1a 0.05 Orthogroups_2024-Update
Bradi2g57537 No alias calreticulin 3 0.05 Orthogroups_2024-Update
Brara.A02267.1 No alias ER luminal lectin chaperone *(CRT) 0.03 Orthogroups_2024-Update
Brara.F00582.1 No alias ER luminal lectin chaperone *(CRT) 0.03 Orthogroups_2024-Update
Brara.I01691.1 No alias ER luminal lectin chaperone *(CRT) 0.02 Orthogroups_2024-Update
Cre01.g038400 No alias calreticulin 1b 0.02 Orthogroups_2024-Update
GRMZM2G074687 No alias calreticulin 1a 0.03 Orthogroups_2024-Update
GRMZM2G358059 No alias calreticulin 1a 0.05 Orthogroups_2024-Update
Glyma.10G147600 No alias calreticulin 1b 0.03 Orthogroups_2024-Update
Glyma.11G126100 No alias calreticulin 3 0.03 Orthogroups_2024-Update
Glyma.12G050700 No alias calreticulin 3 0.02 Orthogroups_2024-Update
Glyma.20G098400 No alias calreticulin 1b 0.06 Orthogroups_2024-Update
Kfl00090_0160 kfl00090_0160_v1.1 (at1g56340 : 471.0) Encodes one of three Arabidopsis... 0.03 Orthogroups_2024-Update
MA_139086g0010 No alias (at1g08450 : 499.0) Encodes one of three Arabidopsis... 0.02 Orthogroups_2024-Update
Seita.J030900.1 No alias ER luminal lectin chaperone *(CRT) 0.03 Orthogroups_2024-Update
Sobic.002G090500.1 No alias ER luminal lectin chaperone *(CRT) 0.02 Orthogroups_2024-Update
Solyc01g100380 No alias Calreticulin (AHRD V3.3 *** CALR_NICPL) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0005783 endoplasmic reticulum IEA InterProScan predictions
BP GO:0006457 protein folding IEA InterProScan predictions
MF GO:0051082 unfolded protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001580 Calret/calnex 31 266
IPR001580 Calret/calnex 268 341
No external refs found!