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  5. Solyc01g109030

Solyc01g109030


Description : transcriptional factor B3 family protein (AHRD V3.3 *-* AT4G31640.1)


Gene families : OG_42_0003962 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003962_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g109030
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
At1g16640 No alias Uncharacterized protein At1g16640 (Fragment)... 0.03 Orthogroups_2024-Update
Brara.F01160.1 No alias REM-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G01207.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051321 meiotic cell cycle IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!