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  5. Sopen01g044060

Sopen01g044060


Description : NB-ARC domain


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g044060
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
At5g46500 No alias Protein VARIATION IN COMPOUND TRIGGERED ROOT growth... 0.03 Orthogroups_2024-Update
At5g51630 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Brara.B00433.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.B02902.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.D00526.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Brara.D01149.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.J01729.1 No alias effector receptor *(NLR) 0.04 Orthogroups_2024-Update
Glyma.03G048500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.03G087500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.06G259800 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.15G160900 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.16G135200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.019G070001 No alias disease resistance protein (TIR-NBS-LRR class) 0.02 Orthogroups_2024-Update
Potri.T077532 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.T112700 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Pp1s14_170V6 No alias tir-nbs-lrr resistance protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002182 NB-ARC 182 413
IPR000157 TIR_dom 8 167
No external refs found!