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  5. Sopen01g044750

Sopen01g044750


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g044750
Cluster HCCA clusters: Cluster_359

Target Alias Description ECC score Gene Family Method Actions
At2g20180 No alias Transcription factor PIF1... 0.03 Orthogroups_2024-Update
GRMZM2G062541 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
Glyma.02G282100 No alias phytochrome interacting factor 4 0.02 Orthogroups_2024-Update
Glyma.10G042800 No alias phytochrome interacting factor 3-like 5 0.02 Orthogroups_2024-Update
Glyma.19G222000 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
HORVU5Hr1G102240.2 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g06900 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.014G111400 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
Seita.9G160700.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Sobic.009G036400.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Solyc04g007430 No alias bHLH transcription factor 031 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 454 500
No external refs found!