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  5. Sopen01g044980

Sopen01g044980


Description : Nucleoporin Nup120/160


Gene families : OG_42_0006858 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g044980
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Bradi3g03637 No alias SUPPRESSOR OF AUXIN RESISTANCE1 0.08 Orthogroups_2024-Update
Cre07.g324000 No alias SUPPRESSOR OF AUXIN RESISTANCE1 0.05 Orthogroups_2024-Update
GRMZM2G167741 No alias SUPPRESSOR OF AUXIN RESISTANCE1 0.04 Orthogroups_2024-Update
Glyma.13G142200 No alias SUPPRESSOR OF AUXIN RESISTANCE1 0.03 Orthogroups_2024-Update
HORVU6Hr1G020420.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP160) 0.07 Orthogroups_2024-Update
Kfl00061_0070 kfl00061_0070_v1.1 (at1g33410 : 143.0) SUPPRESSOR OF AUXIN RESISTANCE1... 0.02 Orthogroups_2024-Update
LOC_Os02g04970 No alias expressed protein 0.02 Orthogroups_2024-Update
Mp8g11350.1 No alias NUP160 scaffold nucleoporin of nuclear pore complex 0.02 Orthogroups_2024-Update
Seita.1G090600.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP160) 0.07 Orthogroups_2024-Update
Sobic.004G038100.1 No alias scaffold nucleoporin of nuclear pore complex *(NUP160) 0.05 Orthogroups_2024-Update
Solyc01g102540 No alias hpoxia-induced protein 242 0.04 Orthogroups_2024-Update
Solyc01g102550 No alias Nuclear pore complex protein Nup160 (AHRD V3.3 *-*... 0.06 Orthogroups_2024-Update
evm.model.tig00000691.37 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR035192 NUP160 545 736
No external refs found!