Sopen01g044990

Description : Eukaryotic translation initiation factor 3 subunit 8 N-terminus

Gene families : OG_42_0002950 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002950_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g044990
Cluster	HCCA clusters: Cluster_115

Target	Alias	Description	ECC score	Gene Family Method
At3g56150	No alias	Eukaryotic translation initiation factor 3 subunit C...	0.03	Orthogroups_2024-Update
Cre04.g217550	No alias	eukaryotic translation initiation factor 3C	0.02	Orthogroups_2024-Update
GRMZM2G115598	No alias	eukaryotic translation initiation factor 3C	0.02	Orthogroups_2024-Update
Glyma.03G206400	No alias	eukaryotic translation initiation factor 3C	0.03	Orthogroups_2024-Update
Glyma.05G245100	No alias	eukaryotic translation initiation factor 3C	0.04	Orthogroups_2024-Update
MA_4671g0010	No alias	(q9xhm1\|if38_medtr : 712.0) Eukaryotic translation...	0.03	Orthogroups_2024-Update
Pp1s6_162V6	No alias	eukaryotic translation initiation factor 3 subunit	0.03	Orthogroups_2024-Update
Seita.2G253000.1	No alias	component *(eIF3c) of eIF3 mRNA-to-PIC binding complex	0.03	Orthogroups_2024-Update
Sobic.002G246700.1	No alias	component *(eIF3c) of eIF3 mRNA-to-PIC binding complex	0.02	Orthogroups_2024-Update
Solyc06g076150	No alias	Eukaryotic translation initiation factor 3 subunit C...	0.03	Orthogroups_2024-Update
Sopen01g045010	No alias	Eukaryotic translation initiation factor 3 subunit 8 N-terminus	0.03	Orthogroups_2024-Update
evm.model.contig_4420.1	No alias	(q9xhm1\|if38_medtr : 393.0) Eukaryotic translation...	0.02	Orthogroups_2024-Update
evm.model.tig00000842.12	No alias	(at3g56150 : 460.0) member of eIF3c - eukaryotic...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	InterProScan predictions
BP	GO:0006413	translational initiation	IEA	InterProScan predictions
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0031369	translation initiation factor binding	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000717	PCI_dom	655	783
IPR008905	EIF3C_N_dom	46	647

External Links

No external refs found!