Sopen01g045250

Description : NB-ARC domain

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g045250
Cluster	HCCA clusters: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18482	No alias	tmv resistance protein n	0.05	Orthogroups_2024-Update
A4A49_32821	No alias	tmv resistance protein n	0.04	Orthogroups_2024-Update
A4A49_36607	No alias	tmv resistance protein n	0.03	Orthogroups_2024-Update
At1g17615	No alias	Disease resistance protein (TIR-NBS class)...	0.03	Orthogroups_2024-Update
At3g44630	No alias	Disease resistance protein (TIR-NBS-LRR class) family...	0.02	Orthogroups_2024-Update
Brara.A03791.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.B00433.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Brara.C04586.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Glyma.16G215000	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.04	Orthogroups_2024-Update
Glyma.20G061300	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.02	Orthogroups_2024-Update
PSME_00055283-RA	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Potri.T129400	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Sopen06g023630	No alias	TIR domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0007165	signal transduction	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	197	416
IPR000157	TIR_dom	14	180

External Links

No external refs found!