Sopen01g045290


Description : NB-ARC domain


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g045290
Cluster HCCA clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
A4A49_18482 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g72860 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
At4g16900 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.03 Orthogroups_2024-Update
At5g49140 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.04 Orthogroups_2024-Update
Brara.B00766.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G03158.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Brara.K01764.1 No alias effector receptor *(NLR) 0.03 Orthogroups_2024-Update
Glyma.02G041800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.03G088000 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.11G153000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.12G240100 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Glyma.16G135500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Glyma.16G214000 No alias Disease resistance protein (NBS-LRR class) family 0.03 Orthogroups_2024-Update
Glyma.18G116601 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
MA_10430064g0020 No alias (at1g27170 : 257.0) transmembrane receptors;ATP binding;... 0.03 Orthogroups_2024-Update
Potri.002G056050 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.003G014200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.008G220200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.011G013701 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Potri.013G097900 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.013G098000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.014G063500 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.014G064300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Potri.T004950 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T037900 No alias transmembrane receptors;ATP binding 0.02 Orthogroups_2024-Update
Pp1s226_63V6 No alias tir-nbs-lrr resistance protein 0.05 Orthogroups_2024-Update
Sopen11g005850 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000157 TIR_dom 35 197
IPR002182 NB-ARC 208 433
No external refs found!