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  5. Solyc01g109180

Solyc01g109180


Description : Long-Chain Acyl-CoA Synthetase (AHRD V3.3 *** A0A0G2SJ83_SALMI)


Gene families : OG_42_0000553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000553_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc01g109180
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Brara.D02836.1 No alias EC_6.2 ligase forming carbon-sulfur bond 0.03 Orthogroups_2024-Update
Brara.I01297.1 No alias EC_6.2 ligase forming carbon-sulfur bond 0.02 Orthogroups_2024-Update
Glyma.20G007900 No alias long-chain acyl-CoA synthetase 2 0.02 Orthogroups_2024-Update
Kfl00274_0140 kfl00274_0140_v1.1 (at4g23850 : 672.0) long-chain acyl-CoA synthetase 4... 0.01 Orthogroups_2024-Update
LOC_Os11g04980 No alias acyl-CoA synthetase protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g35400 No alias AMP-binding enzyme, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G192400 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Sopen01g031020 No alias AMP-binding enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 57 118
IPR000873 AMP-dep_Synth/Lig 164 267
IPR000873 AMP-dep_Synth/Lig 270 515
No external refs found!