Sopen01g045890

Description : YT521-B-like domain

Gene families : OG_42_0000396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g045890
Cluster	HCCA clusters: Cluster_249

Target	Alias	Description	ECC score	Gene Family Method
A4A49_33844	No alias	hypothetical protein	0.07	Orthogroups_2024-Update
Brara.A03292.1	No alias	methylation reader *(ECT)	0.02	Orthogroups_2024-Update
GRMZM2G004997	No alias	evolutionarily conserved C-terminal region 5	0.03	Orthogroups_2024-Update
PSME_00014883-RA	No alias	(at3g13460 : 331.0) Physically interacts with CIPK1.;...	0.04	Orthogroups_2024-Update
Potri.004G223800	No alias	evolutionarily conserved C-terminal region 11	0.03	Orthogroups_2024-Update
Sobic.001G090500.1	No alias	methylation reader *(ECT)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007275	YTH_domain	236	376

External Links

No external refs found!