Sopen01g046380

Description : Zinc finger, C3HC4 type (RING finger)

Gene families : OG_42_0003137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g046380
Cluster	HCCA clusters: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
Kfl00333_0140	kfl00333_0140_v1.1	(at1g72175 : 184.0) FUNCTIONS IN: zinc ion binding;...	0.02	Orthogroups_2024-Update
PSME_00024426-RA	No alias	(at1g22510 : 144.0) RING/U-box protein with domain of...	0.03	Orthogroups_2024-Update
Potri.019G078800	No alias	RING/U-box protein with domain of unknown function (DUF 1232)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018957	Znf_C3HC4_RING-type	130	172

External Links

No external refs found!