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  5. Sopen01g047010

Sopen01g047010


Description : WD domain, G-beta repeat


Gene families : OG_42_0002428 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g047010
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
At2g16780 No alias WD-40 repeat-containing protein MSI2... 0.03 Orthogroups_2024-Update
Brara.I01007.1 No alias component *(CAF1c/MSI) of CAF1 histone chaperone complex... 0.03 Orthogroups_2024-Update
HORVU5Hr1G084160.2 No alias component *(CAF1c/MSI) of CAF1 histone chaperone complex 0.02 Orthogroups_2024-Update
Sobic.001G157600.2 No alias component *(MSI1) of PRC2 histone methylation complex &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 19 88
IPR001680 WD40_repeat 264 302
IPR001680 WD40_repeat 174 207
IPR001680 WD40_repeat 367 402
IPR001680 WD40_repeat 220 256
No external refs found!