Sopen01g047060

Description : WRKY DNA -binding domain

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g047060
Cluster	HCCA clusters: Cluster_166

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07696	No alias	putative wrky transcription factor 33	0.02	Orthogroups_2024-Update
A4A49_10130	No alias	putative wrky transcription factor 33	0.03	Orthogroups_2024-Update
A4A49_27487	No alias	putative wrky transcription factor 23	0.02	Orthogroups_2024-Update
A4A49_40108	No alias	putative wrky transcription factor 51	0.03	Orthogroups_2024-Update
Bradi1g05346	No alias	WRKY DNA-binding protein 39	0.02	Orthogroups_2024-Update
Bradi1g47690	No alias	WRKY family transcription factor family protein	0.02	Orthogroups_2024-Update
Bradi2g08620	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Bradi4g25717	No alias	WRKY DNA-binding protein 55	0.02	Orthogroups_2024-Update
Bradi4g30360	No alias	WRKY DNA-binding protein 40	0.03	Orthogroups_2024-Update
Bradi5g17395	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Brara.E00682.1	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G01694.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.H02398.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00414.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.J01979.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G012724	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
GRMZM2G111711	No alias	WRKY DNA-binding protein 40	0.02	Orthogroups_2024-Update
GRMZM2G139815	No alias	WRKY DNA-binding protein 30	0.03	Orthogroups_2024-Update
GRMZM2G169966	No alias	WRKY DNA-binding protein 33	0.02	Orthogroups_2024-Update
GRMZM2G411766	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
GRMZM5G812272	No alias	WRKY DNA-binding protein 28	0.02	Orthogroups_2024-Update
GRMZM5G863420	No alias	WRKY DNA-binding protein 51	0.02	Orthogroups_2024-Update
GRMZM5G871347	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Glyma.02G010900	No alias	WRKY DNA-binding protein 23	0.03	Orthogroups_2024-Update
Glyma.05G127600	No alias	WRKY DNA-binding protein 28	0.04	Orthogroups_2024-Update
Glyma.05G184500	No alias	WRKY DNA-binding protein 51	0.04	Orthogroups_2024-Update
Glyma.06G168400	No alias	WRKY DNA-binding protein 75	0.02	Orthogroups_2024-Update
Glyma.07G116300	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Glyma.07G133700	No alias	WRKY DNA-binding protein 49	0.03	Orthogroups_2024-Update
Glyma.08G011300	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Glyma.09G029800	No alias	WRKY DNA-binding protein 14	0.02	Orthogroups_2024-Update
Glyma.17G224800	No alias	WRKY DNA-binding protein 50	0.03	Orthogroups_2024-Update
HORVU3Hr1G088200.5	No alias	transcription factor *(WRKY33) & WRKY-type transcription factor	0.02	Orthogroups_2024-Update
HORVU5Hr1G072020.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g54600	No alias	WRKY13, expressed	0.03	Orthogroups_2024-Update
LOC_Os01g60520	No alias	WRKY116, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g39720	No alias	WRKY70, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g49620	No alias	WRKY19, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g39480	No alias	WRKY87, expressed	0.02	Orthogroups_2024-Update
MA_120697g0010	No alias	(at1g29860 : 172.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_126273g0010	No alias	(at1g69310 : 166.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
MA_53351g0010	No alias	(at5g56270 : 326.0) WRKY transcription factor 2; WRKY...	0.04	Orthogroups_2024-Update
PSME_00036210-RA	No alias	(at1g62300 : 137.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00036434-RA	No alias	(at1g62300 : 153.0) Encodes a transcription factor...	0.02	Orthogroups_2024-Update
PSME_00043147-RA	No alias	(at4g22070 : 278.0) member of WRKY Transcription Factor;...	0.02	Orthogroups_2024-Update
PSME_00048777-RA	No alias	(at4g23810 : 118.0) member of WRKY Transcription Factor;...	0.03	Orthogroups_2024-Update
Potri.001G092900	No alias	WRKY family transcription factor	0.02	Orthogroups_2024-Update
Potri.001G352400	No alias	WRKY DNA-binding protein 28	0.03	Orthogroups_2024-Update
Potri.003G138600	No alias	WRKY family transcription factor	0.03	Orthogroups_2024-Update
Potri.014G111900	No alias	WRKY family transcription factor	0.04	Orthogroups_2024-Update
Potri.016G128300	No alias	WRKY DNA-binding protein 33	0.03	Orthogroups_2024-Update
Seita.1G009800.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.2G248500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G131100.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G164900.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Seita.3G355500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G413200.1	No alias	WRKY-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G381300.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G418500.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G276000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G353000.1	No alias	WRKY-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.007G217700.3	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g032950	No alias	WRKY transcription factor 16	0.02	Orthogroups_2024-Update
Solyc05g012770	No alias	WRKY transcription factor 4	0.03	Orthogroups_2024-Update
Solyc08g062490	No alias	WRKY transcription factor 50	0.03	Orthogroups_2024-Update
Solyc08g067340	No alias	WRKY transcription factor 46	0.03	Orthogroups_2024-Update
Solyc12g042590	No alias	WRKY transcription factor 43	0.02	Orthogroups_2024-Update
Sopen03g035820	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update
Sopen08g017970	No alias	WRKY DNA -binding domain	0.05	Orthogroups_2024-Update
Sopen09g005680	No alias	WRKY DNA -binding domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	226	285

External Links

No external refs found!

Sopen01g047060

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation