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  5. Sopen01g047480

Sopen01g047480


Description : Glycosyl hydrolase family 3 N terminal domain


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g047480
Cluster HCCA clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
A4A49_11510 No alias beta-xylosidasealpha-l-arabinofuranosidase 2 0.03 Orthogroups_2024-Update
At5g09700 No alias Glycosyl hydrolase family protein... 0.03 Orthogroups_2024-Update
Brara.G03553.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
GRMZM2G044107 No alias Glycosyl hydrolase family protein 0.02 Orthogroups_2024-Update
Glyma.19G215500 No alias beta-xylosidase 2 0.03 Orthogroups_2024-Update
LOC_Os04g54810 No alias beta-D-xylosidase, putative, expressed 0.02 Orthogroups_2024-Update
MA_4577g0010 No alias (at5g64570 : 920.0) Encodes a beta-d-xylosidase that... 0.02 Orthogroups_2024-Update
PSME_00042009-RA No alias (at5g64570 : 926.0) Encodes a beta-d-xylosidase that... 0.03 Orthogroups_2024-Update
Potri.014G122200 No alias beta-xylosidase 2 0.04 Orthogroups_2024-Update
Seita.8G106400.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Seita.8G107200.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Orthogroups_2024-Update
Sobic.005G110436.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Solyc02g091680 No alias Beta-D-xylosidase (AHRD V3.3 *** A9YWR3_MEDTR) 0.03 Orthogroups_2024-Update
Sopen02g036290 No alias Glycosyl hydrolase family 3 N terminal domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 124 367
IPR002772 Glyco_hydro_3_C 413 641
IPR026891 Fn3-like 702 769
No external refs found!