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  5. Sopen01g047740

Sopen01g047740


Description : CG-1 domain


Gene families : OG_42_0000777 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000777_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g047740
Cluster HCCA clusters: Cluster_365

Target Alias Description ECC score Gene Family Method Actions
At5g09410 No alias Ethylene induced calmodulin binding protein... 0.02 Orthogroups_2024-Update
At5g64220 No alias Calmodulin-binding transcription activator 2... 0.02 Orthogroups_2024-Update
Brara.I00771.1 No alias CAMTA-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.08G178900 No alias Calmodulin-binding transcription activator protein with... 0.02 Orthogroups_2024-Update
HORVU4Hr1G078620.5 No alias CAMTA-type transcription factor 0.04 Orthogroups_2024-Update
Seita.9G380100.1 No alias CAMTA-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002909 IPT_dom 463 548
IPR005559 CG-1_dom 22 134
IPR000048 IQ_motif_EF-hand-BS 872 891
IPR000048 IQ_motif_EF-hand-BS 896 915
No external refs found!