Sopen01g047930

Description : ABC-2 type transporter

Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g047930
Cluster	HCCA clusters: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g29847	No alias	white-brown complex homolog protein 11	0.03	Orthogroups_2024-Update
Bradi5g16400	No alias	white-brown complex homolog protein 11	0.02	Orthogroups_2024-Update
Glyma.08G071100	No alias	white-brown complex homolog protein 11	0.03	Orthogroups_2024-Update
Glyma.13G043000	No alias	white-brown complex homolog protein 11	0.02	Orthogroups_2024-Update
Glyma.13G043500	No alias	white-brown complex homolog protein 11	0.03	Orthogroups_2024-Update
HORVU6Hr1G027440.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Mp4g01480.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Potri.016G056600	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
Seita.7G176000.1	No alias	suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.009G083300.1	No alias	wax lipid exporter *(CER5) & subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Sopen01g047920	No alias	ABC-2 type transporter	0.03	Orthogroups_2024-Update
Sopen06g028380	No alias	ABC transporter	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	53	203
IPR013525	ABC_2_trans	350	562

External Links

No external refs found!