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  5. Sopen01g048290

Sopen01g048290


Description : Terpene synthase family, metal binding domain


Gene families : OG_42_0000258 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g048290
Cluster HCCA clusters: Cluster_345

Target Alias Description ECC score Gene Family Method Actions
At3g25830 No alias 1,8-cineole synthase 2, chloroplastic... 0.03 Orthogroups_2024-Update
At4g16730 No alias terpene synthase 02 [Source:TAIR;Acc:AT4G16730] 0.04 Orthogroups_2024-Update
At4g16740 No alias Tricyclene synthase, chloroplastic... 0.02 Orthogroups_2024-Update
Brara.F03315.1 No alias EC_4.2 carbon-oxygen lyase &... 0.02 Orthogroups_2024-Update
Glyma.09G122500 No alias terpene synthase 03 0.02 Orthogroups_2024-Update
MA_10426551g0010 No alias (p59287|cass_ricco : 248.0) Casbene synthase,... 0.02 Orthogroups_2024-Update
MA_10430954g0010 No alias (at1g61680 : 139.0) terpene synthase 14 (TPS14);... 0.03 Orthogroups_2024-Update
MA_10435955g0030 No alias (at1g61680 : 103.0) terpene synthase 14 (TPS14);... 0.02 Orthogroups_2024-Update
MA_17608g0020 No alias (at4g16740 : 180.0) Encodes an (E,E)-alpha-farnesene... 0.02 Orthogroups_2024-Update
MA_86213g0010 No alias (at4g02780 : 365.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
PSME_00013270-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00013986-RA No alias (at4g16730 : 247.0) In the Col ecotype, no functional... 0.02 Orthogroups_2024-Update
PSME_00015727-RA No alias (at4g16730 : 256.0) In the Col ecotype, no functional... 0.02 Orthogroups_2024-Update
PSME_00015748-RA No alias (p59287|cass_ricco : 234.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00024748-RA No alias (p93665|dcs1_goshi : 247.0) (+)-delta-cadinene synthase... 0.02 Orthogroups_2024-Update
PSME_00030201-RA No alias (at4g02780 : 365.0) Catalyzes the conversion of... 0.02 Orthogroups_2024-Update
PSME_00033301-RA No alias (p59287|cass_ricco : 246.0) Casbene synthase,... 0.03 Orthogroups_2024-Update
PSME_00034521-RA No alias (p93665|dcs1_goshi : 185.0) (+)-delta-cadinene synthase... 0.02 Orthogroups_2024-Update
Potri.001G308300 No alias terpene synthase-like sequence-1,8-cineole 0.03 Orthogroups_2024-Update
Potri.019G022900 No alias terpene synthase-like sequence-1,8-cineole 0.02 Orthogroups_2024-Update
Solyc01g105960 No alias (E)-beta-ocimene synthase 0.04 Orthogroups_2024-Update
Solyc02g079840 No alias terpene synthase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 44 223
IPR005630 Terpene_synthase_metal-bd 254 519
No external refs found!