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Description : Dehydration-responsive protein RD22, putative (AHRD V3.3 *** B9RBD8_RICCO)
Gene families : OG_42_0000366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000366_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc01g109470 | |
| Cluster | HCCA clusters: Cluster_149 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g49320 | No alias | BURP domain protein USPL1... | 0.04 | Orthogroups_2024-Update | |
| Glyma.12G044600 | No alias | unknown seed protein like 1 | 0.03 | Orthogroups_2024-Update | |
| MA_10429742g0010 | No alias | (at1g70370 : 87.4) polygalacturonase 2 (PG2); FUNCTIONS... | 0.03 | Orthogroups_2024-Update | |
| PSME_00025222-RA | No alias | (at5g25610 : 92.4) responsive to dehydration 22 (RD22)... | 0.04 | Orthogroups_2024-Update | |
| PSME_00025223-RA | No alias | (at1g23760 : 93.6) Encodes aromatic rich glycoprotein... | 0.05 | Orthogroups_2024-Update | |
| PSME_00040212-RA | No alias | (at1g70370 : 99.4) polygalacturonase 2 (PG2); FUNCTIONS... | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
| BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
| BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
| BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006950 | response to stress | IEP | Predicted GO |
| BP | GO:0006952 | defense response | IEP | Predicted GO |
| MF | GO:0008061 | chitin binding | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009607 | response to biotic stimulus | IEP | Predicted GO |
| MF | GO:0010333 | terpene synthase activity | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | Predicted GO |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Predicted GO |
| BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
| BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
| BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
| BP | GO:0050896 | response to stimulus | IEP | Predicted GO |
| BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004873 | BURP_dom | 43 | 260 |
| No external refs found! |