Solyc01g109500


Description : Dehydration-responsive protein RD22, putative (AHRD V3.3 *** B9RBD8_RICCO)


Gene families : OG_42_0000366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000366_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g109500
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Brara.F02754.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.H00310.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I00536.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.06G013400 No alias unknown seed protein like 1 0.04 Orthogroups_2024-Update
Glyma.12G044600 No alias unknown seed protein like 1 0.04 Orthogroups_2024-Update
Glyma.14G140900 No alias BURP domain-containing protein 0.03 Orthogroups_2024-Update
MA_10288547g0010 No alias (at5g25610 : 181.0) responsive to dehydration 22 (RD22)... 0.03 Orthogroups_2024-Update
MA_183840g0010 No alias (at5g25610 : 205.0) responsive to dehydration 22 (RD22)... 0.03 Orthogroups_2024-Update
MA_63321g0010 No alias (at5g25610 : 150.0) responsive to dehydration 22 (RD22)... 0.03 Orthogroups_2024-Update
MA_79669g0010 No alias (at1g70370 : 95.9) polygalacturonase 2 (PG2); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00049602-RA No alias (at1g70370 : 85.1) polygalacturonase 2 (PG2); FUNCTIONS... 0.02 Orthogroups_2024-Update
Potri.009G114300 No alias unknown seed protein like 1 0.03 Orthogroups_2024-Update
Sobic.008G157700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR004873 BURP_dom 180 397
No external refs found!