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  5. Sopen01g049420

Sopen01g049420


Description : WD domain, G-beta repeat


Gene families : OG_42_0004410 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g049420
Cluster HCCA clusters: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
At3g19590 No alias BUB3.1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA46] 0.03 Orthogroups_2024-Update
Brara.H00271.1 No alias spindle assembly checkpoint protein *(BUB3) 0.03 Orthogroups_2024-Update
Cre04.g215750 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.10G258300 No alias Transducin/WD40 repeat-like superfamily protein 0.08 Orthogroups_2024-Update
Mp1g09140.1 No alias BUB3 spindle assembly checkpoint protein 0.07 Orthogroups_2024-Update
Potri.009G089200 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Solyc01g107160 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 96 126
IPR001680 WD40_repeat 228 269
IPR001680 WD40_repeat 19 45
No external refs found!