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  5. Sopen01g049850

Sopen01g049850


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0010911 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010911_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g049850
Cluster HCCA clusters: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
At2g15320 No alias Leucine-rich repeat (LRR) family protein... 0.02 Orthogroups_2024-Update
Glyma.09G087300 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Glyma.10G263200 No alias Leucine-rich repeat (LRR) family protein 0.04 Orthogroups_2024-Update
Potri.009G097100 No alias Leucine-rich repeat (LRR) family protein 0.03 Orthogroups_2024-Update
Solyc01g107670 No alias Leucine-rich repeat receptor-like protein kinase family... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 126 185
IPR001611 Leu-rich_rpt 212 254
IPR013210 LRR_N_plant-typ 26 61
IPR001611 Leu-rich_rpt 318 354
No external refs found!