Sopen01g050420


Description : EF hand


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g050420
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At3g03400 No alias Probable calcium-binding protein CML33... 0.02 Orthogroups_2024-Update
Brara.H02086.1 No alias calcium sensor *(CML) 0.04 Orthogroups_2024-Update
Glyma.11G056500 No alias Calcium-binding EF-hand family protein 0.02 Orthogroups_2024-Update
LOC_Os05g31620 No alias OsCML15 - Calmodulin-related calcium sensor protein, expressed 0.03 Orthogroups_2024-Update
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Orthogroups_2024-Update
Mp5g15820.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 Orthogroups_2024-Update
PSME_00046736-RA No alias (at1g24620 : 146.0) EF hand calcium-binding protein... 0.03 Orthogroups_2024-Update
Potri.007G042900 No alias Calcium-binding EF-hand family protein 0.04 Orthogroups_2024-Update
Potri.014G070700 No alias EF hand calcium-binding protein family 0.03 Orthogroups_2024-Update
Sobic.009G120800.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
Solyc03g118810 No alias Calcium binding protein (AHRD V3.3 *** Q93YA8_SESRO) 0.04 Orthogroups_2024-Update
Solyc06g068960 No alias Calcium binding protein (AHRD V3.3 *** Q93YA8_SESRO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 45 105
IPR002048 EF_hand_dom 117 178
No external refs found!