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  5. Sopen01g051310

Sopen01g051310


Description : WD domain, G-beta repeat


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g051310
Cluster HCCA clusters: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Bradi4g02925 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.H00304.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03394.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J00530.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.007G035100 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.6G249500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G242900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g013880 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 221 249
IPR001680 WD40_repeat 139 176
IPR001680 WD40_repeat 389 445
IPR001680 WD40_repeat 350 380
IPR001680 WD40_repeat 112 138
IPR001680 WD40_repeat 255 290
No external refs found!