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  5. Solyc01g109770

Solyc01g109770


Description : RER1 family protein


Gene families : OG_42_0001247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g109770
Cluster HCCA clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
171760 No alias Rer1 family protein 0.03 Orthogroups_2024-Update
Potri.009G118500 No alias endoplasmatic reticulum retrieval protein 1B 0.02 Orthogroups_2024-Update
Solyc04g078510 No alias Rer1 family protein (AHRD V3.3 *** AT4G39220.2) 0.03 Orthogroups_2024-Update
evm.model.tig00020710.65 No alias (at2g23310 : 204.0) Encodes AtRER1C1, a Golgi membrane... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR004932 Rer1 19 180
No external refs found!