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  5. Sopen01g051460

Sopen01g051460


Description : IBR domain


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g051460
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Bradi3g48130 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Brara.G00341.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
GRMZM2G136293 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G121300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
PSME_00028716-RA No alias (at2g16090 : 537.0) ARIADNE 2 (ARI2); FUNCTIONS IN: zinc... 0.02 Orthogroups_2024-Update
Pp1s156_28V6 No alias protein ariadne- 0.03 Orthogroups_2024-Update
Pp1s6_282V6 No alias protein ariadne- 0.02 Orthogroups_2024-Update
Sobic.001G449400.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Solyc11g008580 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G05890.1) 0.03 Orthogroups_2024-Update
evm.model.contig_4402.6 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002867 IBR_dom 270 310
IPR002867 IBR_dom 191 253
No external refs found!