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Sopen01g051490


Description : LytB protein


Gene families : OG_42_0004636 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g051490
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Brara.A00385.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.02 Orthogroups_2024-Update
Brara.H01210.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.02 Orthogroups_2024-Update
Cre08.g372950 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.01 Orthogroups_2024-Update
Glyma.12G046000 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.02 Orthogroups_2024-Update
Mp5g09880.1 No alias 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 0.02 Orthogroups_2024-Update
PSME_00002410-RA No alias (at4g34350 : 655.0) Arabidopsis ISPH is involved in the... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEA InterProScan predictions
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003451 LytB/IspH 108 447
No external refs found!