Sopen01g051700

Description : SWIRM domain

Gene families : OG_42_0001732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen01g051700
Cluster	HCCA clusters: Cluster_137

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp1s119_101V6	No alias	chromatin remodeling complex subunit	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	376	417
IPR032451	SMARCC_C	806	881
IPR000433	Znf_ZZ	318	354
IPR007526	SWIRM	158	243

External Links

No external refs found!