Sopen01g051730


Description : Adaptin N terminal region


Gene families : OG_42_0003878 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003878_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen01g051730
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
268757 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.03 Orthogroups_2024-Update
Bradi1g54510 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.05 Orthogroups_2024-Update
Cre06.g310750 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.03 Orthogroups_2024-Update
Glyma.06G013100 No alias coatomer gamma-2 subunit, putative / gamma-2 coat... 0.03 Orthogroups_2024-Update
HORVU1Hr1G042050.17 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
HORVU4Hr1G065380.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Kfl00637_0070 kfl00637_0070_v1.1 (at4g34450 : 1191.0) coatomer gamma-2 subunit, putative... 0.04 Orthogroups_2024-Update
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Pp1s15_298V6 No alias coatomer protein gamma-subunit 0.04 Orthogroups_2024-Update
Pp1s276_96V6 No alias coatomer protein gamma-subunit 0.02 Orthogroups_2024-Update
Seita.2G076200.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Sobic.002G070600.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Solyc01g109540 No alias Coatomer subunit gamma (AHRD V3.3 *** K4B3G7_SOLLC) 0.02 Orthogroups_2024-Update
evm.model.contig_3427.8 No alias (at4g34450 : 528.0) coatomer gamma-2 subunit, putative /... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0016192 vesicle-mediated transport IEA InterProScan predictions
CC GO:0030117 membrane coat IEA InterProScan predictions
CC GO:0030126 COPI vesicle coat IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013040 Coatomer_gsu_app_Ig-like_dom 621 766
IPR002553 Clathrin/coatomer_adapt-like_N 29 539
IPR032154 Coatomer_g_Cpla 769 883
No external refs found!